ambit2.balloon

Class ShellBalloonWeb

java.lang.Object

ambit2.base.external.CommandShell<INPUT,org.openscience.cdk.interfaces.IAtomContainer>

ambit2.core.external.ShellSDFoutput<org.openscience.cdk.interfaces.IAtomContainer>

ambit2.balloon.ShellBalloon

ambit2.balloon.ShellBalloonWeb

All Implemented Interfaces:

Serializable, net.idea.modbcum.i.processors.IProcessor<org.openscience.cdk.interfaces.IAtomContainer,org.openscience.cdk.interfaces.IAtomContainer>

public class ShellBalloonWeb
extends ShellBalloon

Same as ShellBalloon, but gets the BALOON_HOME var from config file Used in web services.

Author:

nina

See Also:

Serialized Form

Field Summary

Fields inherited from class ambit2.balloon.ShellBalloon

BALLOON_EXE, BALLOON_HOME, hydrogens

Fields inherited from class ambit2.core.external.ShellSDFoutput

readOutput

Fields inherited from class ambit2.base.external.CommandShell

enabled, executables, exitCode, inputFile, logger, os_FreeBSD, os_LINUX, os_LINUX64, os_MAC, os_WINDOWS, os_WINDOWS7, os_WINDOWSVISTA, outputFile, prefix, runAsync, workFolder

Constructor Summary

Constructors

Constructor and Description
ShellBalloonWeb()

Method Summary

Modifier and Type	Method and Description
protected String	getBalloonHome()

Methods inherited from class ambit2.balloon.ShellBalloon

getHomeDir, getOutputFileName, getOutputOption, getPath, initialize, isHydrogens, parseOutput, prepareInput, setHydrogens, toString, transform, writeInputSDF

Methods inherited from class ambit2.core.external.ShellSDFoutput

isReadOutput, setReadOutput

Methods inherited from class ambit2.base.external.CommandShell

addExecutable, addExecutable, addExecutableFreeBSD, addExecutableLinux, addExecutableLinux64, addExecutableMac, addExecutableWin, close, exitCodeOK, getExecutable, getExecutable, getExitCode, getHomeFromConfig, getID, getInputFile, getMsgemptymolecule, getOutputFile, getWorkFolder, isEnabled, open, parseOutput, process, processStdOut, runShell, runShell, setEnabled, setExitCode, setInputFile, setOutputFile, setWorkFolder, transform_input, transform

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

ShellBalloonWeb

public ShellBalloonWeb()
                throws ShellException

Throws:

ShellException

Method Detail

getBalloonHome

protected String getBalloonHome()
                         throws ShellException

Overrides:

getBalloonHome in class ShellBalloon

Throws:

ShellException