ambit2.base.data.study

Class StructureRecordValidator

java.lang.Object

net.idea.modbcum.p.DefaultAmbitProcessor<IStructureRecord,IStructureRecord>

ambit2.base.data.study.StructureRecordValidator

All Implemented Interfaces:

Serializable, net.idea.modbcum.i.processors.IProcessor<IStructureRecord,IStructureRecord>

public class StructureRecordValidator
extends net.idea.modbcum.p.DefaultAmbitProcessor<IStructureRecord,IStructureRecord>

See Also:

Serialized Form

Field Summary

Fields

Modifier and Type	Field and Description
protected String	filename
protected boolean	fixErrors
protected String	prefix

Fields inherited from class net.idea.modbcum.p.DefaultAmbitProcessor

enabled, logger, propertyChangeSupport

Constructor Summary

Constructors

Constructor and Description
StructureRecordValidator()
StructureRecordValidator(String filename, boolean fixErrors, String prefix)

Method Summary

Modifier and Type	Method and Description
static String	generateUUIDfromString(String prefix, String id)
String	getFilename()
String	getPrefix()
boolean	isFixErrors()
protected void	log(SubstanceRecord record, String msg)
IStructureRecord	process(IStructureRecord record)
void	setFilename(String filename)
void	setFixErrors(boolean fixErrors)
void	setPrefix(String prefix)
IStructureRecord	validate(SubstanceRecord record)
IStructureRecord	validate(SubstanceRecord record, CompositionRelation rel)
IStructureRecord	validate(SubstanceRecord record, ProtocolApplication<Protocol,IParams,String,IParams,String> papp)

Methods inherited from class net.idea.modbcum.p.DefaultAmbitProcessor

addPropertyChangeListener, addPropertyChangeListener, close, getID, isEnabled, open, removePropertyChangeListener, removePropertyChangeListener, setEnabled, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

fixErrors

protected boolean fixErrors

prefix

protected String prefix

filename

protected String filename

Constructor Detail

StructureRecordValidator

public StructureRecordValidator()

StructureRecordValidator

public StructureRecordValidator(String filename,
                                boolean fixErrors,
                                String prefix)

Method Detail

getFilename

public String getFilename()

setFilename

public void setFilename(String filename)

getPrefix

public String getPrefix()

setPrefix

public void setPrefix(String prefix)

isFixErrors

public boolean isFixErrors()

setFixErrors

public void setFixErrors(boolean fixErrors)

process

public IStructureRecord process(IStructureRecord record)
                         throws Exception

Throws:

Exception

validate

public IStructureRecord validate(SubstanceRecord record)
                          throws Exception

Throws:

Exception

log

protected void log(SubstanceRecord record,
                   String msg)

validate

public IStructureRecord validate(SubstanceRecord record,
                                 ProtocolApplication<Protocol,IParams,String,IParams,String> papp)
                          throws Exception

Throws:

Exception

validate

public IStructureRecord validate(SubstanceRecord record,
                                 CompositionRelation rel)
                          throws Exception

Throws:

Exception

generateUUIDfromString

public static String generateUUIDfromString(String prefix,
                                            String id)