ambit2.db.processors

Class FP1024Writer

java.lang.Object

net.idea.modbcum.p.DefaultAmbitProcessor<Target,Result>

net.idea.modbcum.p.AbstractDBProcessor<Target,Result>

ambit2.db.processors.AbstractRepositoryWriter<IStructureRecord,IStructureRecord>

ambit2.db.processors.FP1024Writer

All Implemented Interfaces:

Serializable, net.idea.modbcum.i.IDBProcessor<IStructureRecord,IStructureRecord>, net.idea.modbcum.i.processors.IProcessor<IStructureRecord,IStructureRecord>

public class FP1024Writer
extends AbstractRepositoryWriter<IStructureRecord,IStructureRecord>

Writes fingerprints, taken from IStructureRecord.getProperty(AmbitCONSTANTS.Fingerprint). TODO to be replaced by @{link CreateFingerprintChemical}

Author:

nina

See Also:

Serialized Form

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	FP1024Writer.FP1024_status

Nested classes/interfaces inherited from class ambit2.db.processors.AbstractRepositoryWriter

AbstractRepositoryWriter.OP

Field Summary

Fields

Modifier and Type	Field and Description
protected FPTable	fpTable
protected BigInteger[]	h16
protected static String	insert_bitset
protected PreparedStatement	ps_bitset

Fields inherited from class ambit2.db.processors.AbstractRepositoryWriter

exec, operation, queryexec

Fields inherited from class net.idea.modbcum.p.AbstractDBProcessor

closeConnection, connection

Fields inherited from class net.idea.modbcum.p.DefaultAmbitProcessor

enabled, logger, propertyChangeSupport

Constructor Summary

Constructors

Constructor and Description
FP1024Writer()
FP1024Writer(FPTable tableName)

Method Summary

Modifier and Type	Method and Description
void	close()
protected void	prepareStatement(Connection connection)
IStructureRecord	write(IStructureRecord record)
protected void	writeBitSetValue(int idchemical, BitSet bs, long fp_time, FP1024Writer.FP1024_status status)

Methods inherited from class ambit2.db.processors.AbstractRepositoryWriter

create, delete, getOperation, open, process, read, setConnection, setOperation, transaction, update

Methods inherited from class net.idea.modbcum.p.AbstractDBProcessor

getConnection, isCloseConnection, isEnabled, setCloseConnection

Methods inherited from class net.idea.modbcum.p.DefaultAmbitProcessor

addPropertyChangeListener, addPropertyChangeListener, getID, removePropertyChangeListener, removePropertyChangeListener, setEnabled, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface net.idea.modbcum.i.processors.IProcessor

getID, setEnabled

Field Detail

fpTable

protected FPTable fpTable

h16

protected BigInteger[] h16

insert_bitset

protected static final String insert_bitset

See Also:

Constant Field Values

ps_bitset

protected PreparedStatement ps_bitset

Constructor Detail

FP1024Writer

public FP1024Writer()

FP1024Writer

public FP1024Writer(FPTable tableName)

Method Detail

prepareStatement

protected void prepareStatement(Connection connection)
                         throws SQLException

Overrides:

prepareStatement in class AbstractRepositoryWriter<IStructureRecord,IStructureRecord>

Throws:

SQLException

write

public IStructureRecord write(IStructureRecord record)
                       throws SQLException

Overrides:

write in class AbstractRepositoryWriter<IStructureRecord,IStructureRecord>

Throws:

SQLException

writeBitSetValue

protected void writeBitSetValue(int idchemical,
                                BitSet bs,
                                long fp_time,
                                FP1024Writer.FP1024_status status)
                         throws SQLException

Throws:

SQLException

close

public void close()
           throws Exception

Specified by:

close in interface net.idea.modbcum.i.processors.IProcessor<IStructureRecord,IStructureRecord>

Overrides:

close in class AbstractRepositoryWriter<IStructureRecord,IStructureRecord>

Throws:

Exception