ambit2.db.processors.quality

Class QualityLabelWriter

java.lang.Object

net.idea.modbcum.p.DefaultAmbitProcessor<Target,Result>

net.idea.modbcum.p.AbstractDBProcessor<Target,Result>

ambit2.db.processors.AbstractRepositoryWriter<IStructureRecord,IStructureRecord>

ambit2.db.processors.quality.QualityLabelWriter

All Implemented Interfaces:

Serializable, net.idea.modbcum.i.IDBProcessor<IStructureRecord,IStructureRecord>, net.idea.modbcum.i.processors.IProcessor<IStructureRecord,IStructureRecord>

public class QualityLabelWriter
extends AbstractRepositoryWriter<IStructureRecord,IStructureRecord>

See Also:

Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class ambit2.db.processors.AbstractRepositoryWriter

AbstractRepositoryWriter.OP

Field Summary

Fields

Modifier and Type	Field and Description
protected FingerprintGenerator	g
protected MoleculeReader	molReader
protected CreateQLabelFingerprints	query
protected SmilesUniquenessCheck	querySmiles
protected SmilesKey	smilesKey

Fields inherited from class ambit2.db.processors.AbstractRepositoryWriter

exec, operation, queryexec

Fields inherited from class net.idea.modbcum.p.AbstractDBProcessor

closeConnection, connection

Fields inherited from class net.idea.modbcum.p.DefaultAmbitProcessor

enabled, logger, propertyChangeSupport

Constructor Summary

Constructors

Constructor and Description
QualityLabelWriter()

Method Summary

Modifier and Type	Method and Description
IStructureRecord	create(IStructureRecord record)

Methods inherited from class ambit2.db.processors.AbstractRepositoryWriter

close, delete, getOperation, open, prepareStatement, process, read, setConnection, setOperation, transaction, update, write

Methods inherited from class net.idea.modbcum.p.AbstractDBProcessor

getConnection, isCloseConnection, isEnabled, setCloseConnection

Methods inherited from class net.idea.modbcum.p.DefaultAmbitProcessor

addPropertyChangeListener, addPropertyChangeListener, getID, removePropertyChangeListener, removePropertyChangeListener, setEnabled, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface net.idea.modbcum.i.processors.IProcessor

getID, setEnabled

Field Detail

query

protected CreateQLabelFingerprints query

querySmiles

protected SmilesUniquenessCheck querySmiles

molReader

protected MoleculeReader molReader

g

protected FingerprintGenerator g

smilesKey

protected SmilesKey smilesKey

Constructor Detail

QualityLabelWriter

public QualityLabelWriter()

Method Detail

create

public IStructureRecord create(IStructureRecord record)
                        throws SQLException,
                               OperationNotSupportedException,
                               net.idea.modbcum.i.exceptions.AmbitException

Overrides:

create in class AbstractRepositoryWriter<IStructureRecord,IStructureRecord>

Throws:

SQLException

OperationNotSupportedException

net.idea.modbcum.i.exceptions.AmbitException