ambit2.db.search.structure

Class QueryLookupStructure

java.lang.Object

ambit2.db.search.AbstractQuery<F,T,C,IStructureRecord>

ambit2.db.search.structure.AbstractStructureQuery<IStructureKey,IStructureRecord,net.idea.modbcum.q.conditions.EQCondition>

ambit2.db.search.structure.QueryLookupStructure

All Implemented Interfaces:

Serializable, net.idea.modbcum.i.IParameterizedQuery<IStructureKey,IStructureRecord,net.idea.modbcum.q.conditions.EQCondition>, net.idea.modbcum.i.IQueryObject<IStructureRecord>, net.idea.modbcum.i.IQueryRetrieval<IStructureRecord>, net.idea.modbcum.i.IRetrieval<IStructureRecord>, net.idea.modbcum.i.IStatement

public class QueryLookupStructure
extends AbstractStructureQuery<IStructureKey,IStructureRecord,net.idea.modbcum.q.conditions.EQCondition>

This is a wrapper around QueryStructure , allowing to use IStructureRecord as a parameter

Author:

nina

See Also:

Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class ambit2.db.search.structure.AbstractStructureQuery

AbstractStructureQuery.FIELD_NAMES

Field Summary

Fields

Modifier and Type	Field and Description
protected QueryStructure	query
protected MoleculeReader	reader
protected SmilesKey	smiles

Fields inherited from class ambit2.db.search.structure.AbstractStructureQuery

chemicalsOnly, group, nanomaterial, order_descendant, where_group

Fields inherited from class ambit2.db.search.AbstractQuery

condition, fieldname, id, logger, maxRecords, name, page, selected, value

Fields inherited from interface net.idea.modbcum.i.IQueryRetrieval

NaN

Constructor Summary

Constructors

Constructor and Description
QueryLookupStructure()
QueryLookupStructure(ExactStructureSearchMode structureSearchMode)

Method Summary

Modifier and Type	Method and Description
List<net.idea.modbcum.i.query.QueryParam>	getParameters()
String	getSQL()
void	setValue(IStructureRecord value)
String	toString()

Methods inherited from class ambit2.db.search.structure.AbstractStructureQuery

calculateMetric, getObject, isChemicalsOnly, isNanomaterial, isOrder_descendant, isPreferredStructure, isPrescreen, retrieveMetric, retrieveStrucType, retrieveValue, setChemicalsOnly, setNanomaterial, setOrder_descendant

Methods inherited from class ambit2.db.search.AbstractQuery

getCategory, getCondition, getFieldname, getId, getKey, getName, getPage, getPageSize, getValue, isSelected, setCondition, setFieldname, setId, setName, setPage, setPageSize, setSelected, stringify, supportsPaging, test

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface net.idea.modbcum.i.IQueryObject

getCategory, getId, getKey, getPage, getPageSize, setId, setPage, setPageSize, supportsPaging

Field Detail

query

protected QueryStructure query

reader

protected MoleculeReader reader

smiles

protected SmilesKey smiles

Constructor Detail

QueryLookupStructure

public QueryLookupStructure()

QueryLookupStructure

public QueryLookupStructure(ExactStructureSearchMode structureSearchMode)

Method Detail

getParameters

public List<net.idea.modbcum.i.query.QueryParam> getParameters()
                                                        throws net.idea.modbcum.i.exceptions.AmbitException

Throws:

net.idea.modbcum.i.exceptions.AmbitException

getSQL

public String getSQL()
              throws net.idea.modbcum.i.exceptions.AmbitException

Throws:

net.idea.modbcum.i.exceptions.AmbitException

setValue

public void setValue(IStructureRecord value)

Specified by:

setValue in interface net.idea.modbcum.i.IParameterizedQuery<IStructureKey,IStructureRecord,net.idea.modbcum.q.conditions.EQCondition>

Overrides:

setValue in class AbstractQuery<IStructureKey,IStructureRecord,net.idea.modbcum.q.conditions.EQCondition,IStructureRecord>

toString

public String toString()

Overrides:

toString in class AbstractQuery<IStructureKey,IStructureRecord,net.idea.modbcum.q.conditions.EQCondition,IStructureRecord>