ambit2.db.search.structure

Class QueryStructureByQualityPairLabel

java.lang.Object

ambit2.db.search.AbstractQuery<F,T,C,IStructureRecord>

ambit2.db.search.structure.AbstractStructureQuery<ISourceDataset,ConsensusLabel,net.idea.modbcum.q.conditions.StringCondition>

ambit2.db.search.structure.QueryStructureByQualityPairLabel

All Implemented Interfaces:

Serializable, net.idea.modbcum.i.IParameterizedQuery<ISourceDataset,ConsensusLabel,net.idea.modbcum.q.conditions.StringCondition>, net.idea.modbcum.i.IQueryObject<IStructureRecord>, net.idea.modbcum.i.IQueryRetrieval<IStructureRecord>, net.idea.modbcum.i.IRetrieval<IStructureRecord>, net.idea.modbcum.i.IStatement

public class QueryStructureByQualityPairLabel
extends AbstractStructureQuery<ISourceDataset,ConsensusLabel,net.idea.modbcum.q.conditions.StringCondition>

See Also:

Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class ambit2.db.search.structure.AbstractStructureQuery

AbstractStructureQuery.FIELD_NAMES

Field Summary

Fields

Modifier and Type	Field and Description
protected static String	join_struc_query
static String	sql
static String	sql_chemical
static String	where
static String	where_null
protected static String	where_struc_dataset
protected static String	where_struc_query
static String	where_text

Fields inherited from class ambit2.db.search.structure.AbstractStructureQuery

chemicalsOnly, group, nanomaterial, order_descendant, where_group

Fields inherited from class ambit2.db.search.AbstractQuery

condition, fieldname, id, logger, maxRecords, name, page, selected, value

Fields inherited from interface net.idea.modbcum.i.IQueryRetrieval

NaN

Constructor Summary

Constructors

Constructor and Description
QueryStructureByQualityPairLabel()
QueryStructureByQualityPairLabel(ConsensusLabel.CONSENSUS_LABELS label)
QueryStructureByQualityPairLabel(String label)

Method Summary

Modifier and Type	Method and Description
double	calculateMetric(IStructureRecord object)
String	getCategory()
String	getKey()
List<net.idea.modbcum.i.query.QueryParam>	getParameters()
String	getSQL()
boolean	isPrescreen()
Object	retrieveValue(ResultSet rs)
String	toString()

Methods inherited from class ambit2.db.search.structure.AbstractStructureQuery

getObject, isChemicalsOnly, isNanomaterial, isOrder_descendant, isPreferredStructure, retrieveMetric, retrieveStrucType, setChemicalsOnly, setNanomaterial, setOrder_descendant

Methods inherited from class ambit2.db.search.AbstractQuery

getCondition, getFieldname, getId, getName, getPage, getPageSize, getValue, isSelected, setCondition, setFieldname, setId, setName, setPage, setPageSize, setSelected, setValue, stringify, supportsPaging, test

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface net.idea.modbcum.i.IQueryObject

getId, getPage, getPageSize, setId, setPage, setPageSize, supportsPaging

Field Detail

sql

public static final String sql

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Constant Field Values

sql_chemical

public static final String sql_chemical

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Constant Field Values

where

public static final String where

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Constant Field Values

where_null

public static final String where_null

See Also:

Constant Field Values

where_text

public static final String where_text

See Also:

Constant Field Values

where_struc_dataset

protected static final String where_struc_dataset

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Constant Field Values

join_struc_query

protected static final String join_struc_query

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Constant Field Values

where_struc_query

protected static final String where_struc_query

See Also:

Constant Field Values

Constructor Detail

QueryStructureByQualityPairLabel

public QueryStructureByQualityPairLabel()

QueryStructureByQualityPairLabel

public QueryStructureByQualityPairLabel(ConsensusLabel.CONSENSUS_LABELS label)

QueryStructureByQualityPairLabel

public QueryStructureByQualityPairLabel(String label)

Method Detail

getSQL

public String getSQL()
              throws net.idea.modbcum.i.exceptions.AmbitException

Throws:

net.idea.modbcum.i.exceptions.AmbitException

getParameters

public List<net.idea.modbcum.i.query.QueryParam> getParameters()
                                                        throws net.idea.modbcum.i.exceptions.AmbitException

Throws:

net.idea.modbcum.i.exceptions.AmbitException

toString

public String toString()

Overrides:

toString in class AbstractQuery<ISourceDataset,ConsensusLabel,net.idea.modbcum.q.conditions.StringCondition,IStructureRecord>

retrieveValue

public Object retrieveValue(ResultSet rs)
                     throws SQLException

Overrides:

retrieveValue in class AbstractStructureQuery<ISourceDataset,ConsensusLabel,net.idea.modbcum.q.conditions.StringCondition>

Throws:

SQLException

getKey

public String getKey()

Specified by:

getKey in interface net.idea.modbcum.i.IQueryObject<IStructureRecord>

Overrides:

getKey in class AbstractQuery<ISourceDataset,ConsensusLabel,net.idea.modbcum.q.conditions.StringCondition,IStructureRecord>

getCategory

public String getCategory()

Specified by:

getCategory in interface net.idea.modbcum.i.IQueryObject<IStructureRecord>

Overrides:

getCategory in class AbstractQuery<ISourceDataset,ConsensusLabel,net.idea.modbcum.q.conditions.StringCondition,IStructureRecord>

calculateMetric

public double calculateMetric(IStructureRecord object)

Specified by:

calculateMetric in interface net.idea.modbcum.i.IQueryRetrieval<IStructureRecord>

Overrides:

calculateMetric in class AbstractStructureQuery<ISourceDataset,ConsensusLabel,net.idea.modbcum.q.conditions.StringCondition>

isPrescreen

public boolean isPrescreen()

Specified by:

isPrescreen in interface net.idea.modbcum.i.IQueryRetrieval<IStructureRecord>

Overrides:

isPrescreen in class AbstractStructureQuery<ISourceDataset,ConsensusLabel,net.idea.modbcum.q.conditions.StringCondition>