ambit2.db.search.structure.pairwise

Class QueryStructurePairs<Dataset1,Dataset2>

java.lang.Object

ambit2.db.search.AbstractQuery<Dataset1,Dataset2,net.idea.modbcum.q.conditions.NumberCondition,IStructureRecord[]>

ambit2.db.search.structure.pairwise.QueryStructurePairs<Dataset1,Dataset2>

Type Parameters:

Dataset1 -

Dataset2 -

All Implemented Interfaces:

Serializable, net.idea.modbcum.i.IParameterizedQuery<Dataset1,Dataset2,net.idea.modbcum.q.conditions.NumberCondition>, net.idea.modbcum.i.IQueryObject<IStructureRecord[]>, net.idea.modbcum.i.IQueryRetrieval<IStructureRecord[]>, net.idea.modbcum.i.IRetrieval<IStructureRecord[]>, net.idea.modbcum.i.IStatement

Direct Known Subclasses:

QueryStructurePairsDataset, QueryStructurePairsMixed, QueryStructurePairsRDataset

public abstract class QueryStructurePairs<Dataset1,Dataset2>
extends AbstractQuery<Dataset1,Dataset2,net.idea.modbcum.q.conditions.NumberCondition,IStructureRecord[]>
implements net.idea.modbcum.i.IQueryRetrieval<IStructureRecord[]>

returns idstructure of two molecules

Author:

nina

See Also:

Serialized Form

Field Summary

Fields

Modifier and Type	Field and Description
protected IStructureRecord[]	records

Fields inherited from class ambit2.db.search.AbstractQuery

condition, fieldname, id, logger, maxRecords, name, page, selected, value

Fields inherited from interface net.idea.modbcum.i.IQueryRetrieval

NaN

Constructor Summary

Constructors

Constructor and Description
QueryStructurePairs()

Method Summary

Modifier and Type	Method and Description
double	calculateMetric(IStructureRecord[] object)
IStructureRecord[]	getObject(ResultSet rs)
boolean	isPrescreen()

Methods inherited from class ambit2.db.search.AbstractQuery

getCategory, getCondition, getFieldname, getId, getKey, getName, getPage, getPageSize, getValue, isSelected, setCondition, setFieldname, setId, setName, setPage, setPageSize, setSelected, setValue, stringify, supportsPaging, test, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface net.idea.modbcum.i.IQueryObject

getCategory, getId, getKey, getPage, getPageSize, getParameters, getSQL, setId, setPage, setPageSize, supportsPaging

Field Detail

records

protected IStructureRecord[] records

Constructor Detail

QueryStructurePairs

public QueryStructurePairs()

Method Detail

calculateMetric

public double calculateMetric(IStructureRecord[] object)

Specified by:

calculateMetric in interface net.idea.modbcum.i.IQueryRetrieval<IStructureRecord[]>

isPrescreen

public boolean isPrescreen()

Specified by:

isPrescreen in interface net.idea.modbcum.i.IQueryRetrieval<IStructureRecord[]>

getObject

public IStructureRecord[] getObject(ResultSet rs)
                             throws net.idea.modbcum.i.exceptions.AmbitException

Specified by:

getObject in interface net.idea.modbcum.i.IRetrieval<IStructureRecord[]>

Throws:

net.idea.modbcum.i.exceptions.AmbitException