ambit2.db.substance.relation

Class ChemicalBySubstanceRelation

java.lang.Object

ambit2.db.search.AbstractQuery<F,T,C,IStructureRecord>

ambit2.db.search.structure.AbstractStructureQuery<STRUCTURE_RELATION,String,net.idea.modbcum.q.conditions.EQCondition>

ambit2.db.substance.relation.ChemicalBySubstanceRelation

All Implemented Interfaces:

Serializable, net.idea.modbcum.i.IParameterizedQuery<STRUCTURE_RELATION,String,net.idea.modbcum.q.conditions.EQCondition>, net.idea.modbcum.i.IQueryObject<IStructureRecord>, net.idea.modbcum.i.IQueryRetrieval<IStructureRecord>, net.idea.modbcum.i.IRetrieval<IStructureRecord>, net.idea.modbcum.i.IStatement

public class ChemicalBySubstanceRelation
extends AbstractStructureQuery<STRUCTURE_RELATION,String,net.idea.modbcum.q.conditions.EQCondition>

Returns all chemicals which are component of a substance. Main intention to be used as a scope query for QueryCombined (e.g. restricting similarity and substructure search to compounds having associated substances)

Author:

nina

See Also:

Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class ambit2.db.search.structure.AbstractStructureQuery

AbstractStructureQuery.FIELD_NAMES

Field Summary

Fields

Modifier and Type	Field and Description
static String	sql

Fields inherited from class ambit2.db.search.structure.AbstractStructureQuery

chemicalsOnly, group, nanomaterial, order_descendant, where_group

Fields inherited from class ambit2.db.search.AbstractQuery

condition, fieldname, id, logger, maxRecords, name, page, selected, value

Fields inherited from interface net.idea.modbcum.i.IQueryRetrieval

NaN

Constructor Summary

Constructors

Constructor and Description
ChemicalBySubstanceRelation()
ChemicalBySubstanceRelation(STRUCTURE_RELATION relation)

Method Summary

Modifier and Type	Method and Description
IStructureRecord	getObject(ResultSet rs)
List<net.idea.modbcum.i.query.QueryParam>	getParameters()
String	getSQL()
String	toString()

Methods inherited from class ambit2.db.search.structure.AbstractStructureQuery

calculateMetric, isChemicalsOnly, isNanomaterial, isOrder_descendant, isPreferredStructure, isPrescreen, retrieveMetric, retrieveStrucType, retrieveValue, setChemicalsOnly, setNanomaterial, setOrder_descendant

Methods inherited from class ambit2.db.search.AbstractQuery

getCategory, getCondition, getFieldname, getId, getKey, getName, getPage, getPageSize, getValue, isSelected, setCondition, setFieldname, setId, setName, setPage, setPageSize, setSelected, setValue, stringify, supportsPaging, test

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface net.idea.modbcum.i.IQueryObject

getCategory, getId, getKey, getPage, getPageSize, setId, setPage, setPageSize, supportsPaging

Field Detail

sql

public static final String sql

See Also:

Constant Field Values

Constructor Detail

ChemicalBySubstanceRelation

public ChemicalBySubstanceRelation()

ChemicalBySubstanceRelation

public ChemicalBySubstanceRelation(STRUCTURE_RELATION relation)

Method Detail

getSQL

public String getSQL()
              throws net.idea.modbcum.i.exceptions.AmbitException

Throws:

net.idea.modbcum.i.exceptions.AmbitException

getParameters

public List<net.idea.modbcum.i.query.QueryParam> getParameters()
                                                        throws net.idea.modbcum.i.exceptions.AmbitException

Throws:

net.idea.modbcum.i.exceptions.AmbitException

toString

public String toString()

Overrides:

toString in class AbstractQuery<STRUCTURE_RELATION,String,net.idea.modbcum.q.conditions.EQCondition,IStructureRecord>

getObject

public IStructureRecord getObject(ResultSet rs)
                           throws net.idea.modbcum.i.exceptions.AmbitException

Specified by:

getObject in interface net.idea.modbcum.i.IRetrieval<IStructureRecord>

Overrides:

getObject in class AbstractStructureQuery<STRUCTURE_RELATION,String,net.idea.modbcum.q.conditions.EQCondition>

Throws:

net.idea.modbcum.i.exceptions.AmbitException