ambit2.db.substance.relation

Class ReadSubstanceRelation

java.lang.Object

ambit2.db.search.AbstractQuery<F,T,C,IStructureRecord>

ambit2.db.search.structure.AbstractStructureQuery<STRUCTURE_RELATION,SubstanceRecord,net.idea.modbcum.q.conditions.NumberCondition>

ambit2.db.substance.relation.ReadSubstanceRelation

All Implemented Interfaces:

Serializable, net.idea.modbcum.i.IParameterizedQuery<STRUCTURE_RELATION,SubstanceRecord,net.idea.modbcum.q.conditions.NumberCondition>, net.idea.modbcum.i.IQueryObject<IStructureRecord>, net.idea.modbcum.i.IQueryRetrieval<IStructureRecord>, net.idea.modbcum.i.IRetrieval<IStructureRecord>, net.idea.modbcum.i.IStatement

public class ReadSubstanceRelation
extends AbstractStructureQuery<STRUCTURE_RELATION,SubstanceRecord,net.idea.modbcum.q.conditions.NumberCondition>

Reads all structures, related to the query substance via substance_relation table

Author:

nina

See Also:

Serialized Form

Nested Class Summary

Nested classes/interfaces inherited from class ambit2.db.search.structure.AbstractStructureQuery

AbstractStructureQuery.FIELD_NAMES

Field Summary

Fields inherited from class ambit2.db.search.structure.AbstractStructureQuery

chemicalsOnly, group, nanomaterial, order_descendant, where_group

Fields inherited from class ambit2.db.search.AbstractQuery

condition, fieldname, id, logger, maxRecords, name, page, selected, value

Fields inherited from interface net.idea.modbcum.i.IQueryRetrieval

NaN

Constructor Summary

Constructors

Constructor and Description
ReadSubstanceRelation()
ReadSubstanceRelation(STRUCTURE_RELATION relation, SubstanceRecord id)
ReadSubstanceRelation(SubstanceRecord structure)

Method Summary

Modifier and Type	Method and Description
double	calculateMetric(IStructureRecord object)
IStructureRecord	getObject(ResultSet rs)
List<net.idea.modbcum.i.query.QueryParam>	getParameters()
String	getSQL()
boolean	isPrescreen()
protected void	retrieveMetric(IStructureRecord record, ResultSet rs)
String	toString()

Methods inherited from class ambit2.db.search.structure.AbstractStructureQuery

isChemicalsOnly, isNanomaterial, isOrder_descendant, isPreferredStructure, retrieveStrucType, retrieveValue, setChemicalsOnly, setNanomaterial, setOrder_descendant

Methods inherited from class ambit2.db.search.AbstractQuery

getCategory, getCondition, getFieldname, getId, getKey, getName, getPage, getPageSize, getValue, isSelected, setCondition, setFieldname, setId, setName, setPage, setPageSize, setSelected, setValue, stringify, supportsPaging, test

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface net.idea.modbcum.i.IQueryObject

getCategory, getId, getKey, getPage, getPageSize, setId, setPage, setPageSize, supportsPaging

Constructor Detail

ReadSubstanceRelation

public ReadSubstanceRelation(SubstanceRecord structure)

ReadSubstanceRelation

public ReadSubstanceRelation()

ReadSubstanceRelation

public ReadSubstanceRelation(STRUCTURE_RELATION relation,
                             SubstanceRecord id)

Method Detail

getSQL

public String getSQL()
              throws net.idea.modbcum.i.exceptions.AmbitException

Throws:

net.idea.modbcum.i.exceptions.AmbitException

getParameters

public List<net.idea.modbcum.i.query.QueryParam> getParameters()
                                                        throws net.idea.modbcum.i.exceptions.AmbitException

Throws:

net.idea.modbcum.i.exceptions.AmbitException

toString

public String toString()

Overrides:

toString in class AbstractQuery<STRUCTURE_RELATION,SubstanceRecord,net.idea.modbcum.q.conditions.NumberCondition,IStructureRecord>

isPrescreen

public boolean isPrescreen()

Specified by:

isPrescreen in interface net.idea.modbcum.i.IQueryRetrieval<IStructureRecord>

Overrides:

isPrescreen in class AbstractStructureQuery<STRUCTURE_RELATION,SubstanceRecord,net.idea.modbcum.q.conditions.NumberCondition>

calculateMetric

public double calculateMetric(IStructureRecord object)

Specified by:

calculateMetric in interface net.idea.modbcum.i.IQueryRetrieval<IStructureRecord>

Overrides:

calculateMetric in class AbstractStructureQuery<STRUCTURE_RELATION,SubstanceRecord,net.idea.modbcum.q.conditions.NumberCondition>

retrieveMetric

protected void retrieveMetric(IStructureRecord record,
                              ResultSet rs)
                       throws SQLException

Overrides:

retrieveMetric in class AbstractStructureQuery<STRUCTURE_RELATION,SubstanceRecord,net.idea.modbcum.q.conditions.NumberCondition>

Throws:

SQLException

getObject

public IStructureRecord getObject(ResultSet rs)
                           throws net.idea.modbcum.i.exceptions.AmbitException

Specified by:

getObject in interface net.idea.modbcum.i.IRetrieval<IStructureRecord>

Overrides:

getObject in class AbstractStructureQuery<STRUCTURE_RELATION,SubstanceRecord,net.idea.modbcum.q.conditions.NumberCondition>

Throws:

net.idea.modbcum.i.exceptions.AmbitException