ambit2.groupcontribution.cli

Class GroupContributionCli

java.lang.Object

ambit2.groupcontribution.cli.GroupContributionCli

public class GroupContributionCli
extends Object

Field Summary

Fields

Modifier and Type	Field and Description
String	corFactors
String	externalSetFile
boolean	FlagFragmenationOnly
int	fractionDigits
String	gcmConfigFile
String	gcmType
String	globalDescriptors
String	localDescriptors
String	matrixOutputFile
String	outputGCMFile
String	resultBufferOutFile
String	targetProperty
Double	threshold
String	trainSetFile
String	validation

Constructor Summary

Constructors

Constructor and Description
GroupContributionCli()

Method Summary

Modifier and Type	Method and Description
protected static org.apache.commons.cli.Options	createOptions()
static void	main(String[] args)
protected static void	printHelp(org.apache.commons.cli.Options options, String message)
int	run(String[] args)
protected int	runGCM()
void	setOption(ambit2.groupcontribution.cli.GroupContributionCli._option option, String argument)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

trainSetFile

public String trainSetFile

externalSetFile

public String externalSetFile

matrixOutputFile

public String matrixOutputFile

gcmConfigFile

public String gcmConfigFile

outputGCMFile

public String outputGCMFile

localDescriptors

public String localDescriptors

globalDescriptors

public String globalDescriptors

targetProperty

public String targetProperty

threshold

public Double threshold

gcmType

public String gcmType

validation

public String validation

corFactors

public String corFactors

resultBufferOutFile

public String resultBufferOutFile

FlagFragmenationOnly

public boolean FlagFragmenationOnly

fractionDigits

public int fractionDigits

Constructor Detail

GroupContributionCli

public GroupContributionCli()

Method Detail

main

public static void main(String[] args)

createOptions

protected static org.apache.commons.cli.Options createOptions()

printHelp

protected static void printHelp(org.apache.commons.cli.Options options,
                                String message)

setOption

public void setOption(ambit2.groupcontribution.cli.GroupContributionCli._option option,
                      String argument)
               throws Exception

Throws:

Exception

run

public int run(String[] args)

runGCM

protected int runGCM()
              throws Exception

Throws:

Exception