ambit2.rest.task

Class CallableDatasetCreator

java.lang.Object

ambit2.rest.task.CallableDatasetCreator

All Implemented Interfaces:

Callable<org.restlet.data.Reference>

public class CallableDatasetCreator
extends Object
implements Callable<org.restlet.data.Reference>

Creates a compatible dataset, given a model and a dataset of compounds 1)Retrieve model representation 2)Retrieve independent features representation. 2a)create a new dataset/Rx with independent features relevant to model 3)Get ot:hasSource for each independent feature 4)launch descriptor calculation for the dataset and feature source - only for compounds without feature values 5)/dataset/Rx should be ready 6)submit the new dataset to prediction

Author:

nina

Field Summary

Fields

Modifier and Type	Field and Description
protected Hashtable<org.restlet.data.Reference,OTRemoteTask>	algorithms
protected org.restlet.data.Reference	applicationRoot
protected org.restlet.data.Reference	datasetService
protected String	datasetURI
protected org.restlet.data.Form	featuresQuery
protected org.restlet.data.Form	input
protected OTRemoteTaskPool	jobs
protected String	modelURI
protected String	referer
protected PropertyChangeSupport	support

Constructor Summary

Constructors

Constructor and Description
CallableDatasetCreator(org.restlet.data.Form form, org.restlet.data.Reference applicationRoot, org.restlet.data.Reference datasetService, String referer)

Method Summary

Modifier and Type	Method and Description
protected void	addJob(org.restlet.data.Reference algorithm, List<String> features)
void	addPropertyChangeListener(PropertyChangeListener listener)
org.restlet.data.Reference	call()
protected org.restlet.data.Reference	callInternal()
static org.restlet.data.Reference	createFilterReference(String root, String dataset, String[] features)
protected void	finalize()
void	firePropertyChange(String propertyName, Object oldValue, Object newValue)
protected void	launchFeaturesCalculations(com.hp.hpl.jena.rdf.model.Model jenaModel, String model)
void	removePropertyChangeListener(PropertyChangeListener listener)
protected void	run(org.restlet.data.Reference modelURI)

Methods inherited from class java.lang.Object

clone, equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

support

protected PropertyChangeSupport support

applicationRoot

protected org.restlet.data.Reference applicationRoot

modelURI

protected String modelURI

datasetURI

protected String datasetURI

datasetService

protected org.restlet.data.Reference datasetService

input

protected org.restlet.data.Form input

jobs

protected OTRemoteTaskPool jobs

algorithms

protected Hashtable<org.restlet.data.Reference,OTRemoteTask> algorithms

featuresQuery

protected org.restlet.data.Form featuresQuery

referer

protected String referer

Constructor Detail

CallableDatasetCreator

public CallableDatasetCreator(org.restlet.data.Form form,
                              org.restlet.data.Reference applicationRoot,
                              org.restlet.data.Reference datasetService,
                              String referer)
                       throws org.restlet.resource.ResourceException

Throws:

org.restlet.resource.ResourceException

Method Detail

call

public org.restlet.data.Reference call()
                                throws Exception

Specified by:

call in interface Callable<org.restlet.data.Reference>

Throws:

Exception

callInternal

protected org.restlet.data.Reference callInternal()
                                           throws Exception

Throws:

Exception

run

protected void run(org.restlet.data.Reference modelURI)
            throws Exception

Throws:

Exception

launchFeaturesCalculations

protected void launchFeaturesCalculations(com.hp.hpl.jena.rdf.model.Model jenaModel,
                                          String model)

addJob

protected void addJob(org.restlet.data.Reference algorithm,
                      List<String> features)

createFilterReference

public static org.restlet.data.Reference createFilterReference(String root,
                                                               String dataset,
                                                               String[] features)

addPropertyChangeListener

public void addPropertyChangeListener(PropertyChangeListener listener)

removePropertyChangeListener

public void removePropertyChangeListener(PropertyChangeListener listener)

firePropertyChange

public void firePropertyChange(String propertyName,
                               Object oldValue,
                               Object newValue)

finalize

protected void finalize()
                 throws Throwable

Overrides:

finalize in class Object

Throws:

Throwable