ambit2.core.io
Class RawIteratingReader<T>

java.lang.Object
  org.openscience.cdk.io.iterator.DefaultIteratingChemObjectReader
      ambit2.core.io.RawIteratingReader<T>

All Implemented Interfaces:

IRawReader<T>, java.util.Iterator, org.openscience.cdk.io.IChemObjectIO, org.openscience.cdk.io.iterator.IIteratingChemObjectReader

Direct Known Subclasses:

RawIteratingMOLReader, RawIteratingSDFReader

public abstract class RawIteratingReader<T>
extends org.openscience.cdk.io.iterator.DefaultIteratingChemObjectReader
implements IRawReader<T>

Field Summary

protected static ambit2.base.log.AmbitLogger	logger
protected java.lang.StringBuffer	recordBuffer
protected ambit2.base.data.LiteratureEntry	reference

Constructor Summary

RawIteratingReader(java.io.Reader in)

Method Summary

void	close()
abstract org.openscience.cdk.io.formats.IResourceFormat	getFormat()
ambit2.base.data.LiteratureEntry	getReference()
boolean	hasNext()
abstract boolean	isEndOfRecord(java.lang.String line)
java.lang.Object	next()
abstract T	nextRecord()
void	setReference(ambit2.base.data.LiteratureEntry reference)

Methods inherited from class org.openscience.cdk.io.iterator.DefaultIteratingChemObjectReader

accepts, addChemObjectIOListener, fireFrameRead, fireIOSettingQuestion, getIOSettings, remove, removeChemObjectIOListener

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.openscience.cdk.io.IChemObjectIO

accepts, addChemObjectIOListener, getIOSettings, removeChemObjectIOListener

Methods inherited from interface java.util.Iterator

remove

Field Detail

logger

protected static ambit2.base.log.AmbitLogger logger

recordBuffer

protected java.lang.StringBuffer recordBuffer

reference

protected ambit2.base.data.LiteratureEntry reference

Constructor Detail

RawIteratingReader

public RawIteratingReader(java.io.Reader in)

Method Detail

getReference

public ambit2.base.data.LiteratureEntry getReference()

setReference

public void setReference(ambit2.base.data.LiteratureEntry reference)

getFormat

public abstract org.openscience.cdk.io.formats.IResourceFormat getFormat()

Specified by:

getFormat in interface org.openscience.cdk.io.IChemObjectIO

close

public void close()
           throws java.io.IOException

Specified by:

close in interface org.openscience.cdk.io.IChemObjectIO

Throws:

java.io.IOException

hasNext

public boolean hasNext()

Specified by:

hasNext in interface java.util.Iterator

next

public java.lang.Object next()

Specified by:

next in interface java.util.Iterator

nextRecord

public abstract T nextRecord()

Specified by:

nextRecord in interface IRawReader<T>

isEndOfRecord

public abstract boolean isEndOfRecord(java.lang.String line)