ambit2.core.processors.structure.key
Class SmilesKey

java.lang.Object
  ambit2.base.processors.DefaultAmbitProcessor<org.openscience.cdk.interfaces.IAtomContainer,java.lang.String>
      ambit2.core.processors.structure.key.SmilesKey

All Implemented Interfaces:

ambit2.base.interfaces.IProcessor<org.openscience.cdk.interfaces.IAtomContainer,java.lang.String>, IStructureKey<org.openscience.cdk.interfaces.IAtomContainer,java.lang.String>, java.io.Serializable

public class SmilesKey
extends ambit2.base.processors.DefaultAmbitProcessor<org.openscience.cdk.interfaces.IAtomContainer,java.lang.String>
implements IStructureKey<org.openscience.cdk.interfaces.IAtomContainer,java.lang.String>

Returns smiles, given the structure

See Also:

Serialized Form

Field Summary

protected org.openscience.cdk.smiles.SmilesGenerator	gen
protected java.lang.Object	key

Fields inherited from class ambit2.base.processors.DefaultAmbitProcessor

enabled, logger, propertyChangeSupport

Constructor Summary

SmilesKey()

Method Summary

java.lang.Object	getKey()
java.lang.Object	getQueryKey()
java.lang.Class	getType()
java.lang.String	process(org.openscience.cdk.interfaces.IAtomContainer molecule)
void	setKey(java.lang.Object key)

Methods inherited from class ambit2.base.processors.DefaultAmbitProcessor

addPropertyChangeListener, addPropertyChangeListener, getID, isEnabled, removePropertyChangeListener, removePropertyChangeListener, setEnabled, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface ambit2.base.interfaces.IProcessor

getID, isEnabled, setEnabled

Field Detail

gen

protected org.openscience.cdk.smiles.SmilesGenerator gen

key

protected java.lang.Object key

Constructor Detail

SmilesKey

public SmilesKey()

Method Detail

getKey

public java.lang.Object getKey()

Specified by:

getKey in interface IStructureKey<org.openscience.cdk.interfaces.IAtomContainer,java.lang.String>

setKey

public void setKey(java.lang.Object key)

process

public java.lang.String process(org.openscience.cdk.interfaces.IAtomContainer molecule)
                         throws ambit2.base.exceptions.AmbitException

Specified by:

process in interface ambit2.base.interfaces.IProcessor<org.openscience.cdk.interfaces.IAtomContainer,java.lang.String>

Throws:

ambit2.base.exceptions.AmbitException

getQueryKey

public java.lang.Object getQueryKey()

Specified by:

getQueryKey in interface IStructureKey<org.openscience.cdk.interfaces.IAtomContainer,java.lang.String>

getType

public java.lang.Class getType()

Specified by:

getType in interface IStructureKey<org.openscience.cdk.interfaces.IAtomContainer,java.lang.String>