ambit2.core.smiles
Class SmilesParserWrapper

java.lang.Object
  ambit2.core.smiles.SmilesParserWrapper

All Implemented Interfaces:

java.beans.PropertyChangeListener, java.util.EventListener

public class SmilesParserWrapper
extends java.lang.Object
implements java.beans.PropertyChangeListener

Nested Class Summary

static class

SmilesParserWrapper.SMILES_PARSER

Field Summary

protected OpenBabelShell	babel
protected org.openscience.cdk.smiles.SmilesParser	cdkParser
protected DeduceBondSystemTool	dbt
protected SmilesParserWrapper.SMILES_PARSER	parser
protected static SmilesParserWrapper	wrapper

Constructor Summary

protected	SmilesParserWrapper()
protected	SmilesParserWrapper(SmilesParserWrapper.SMILES_PARSER mode)

Method Summary

static SmilesParserWrapper	getInstance()
static SmilesParserWrapper	getInstance(SmilesParserWrapper.SMILES_PARSER mode)
SmilesParserWrapper.SMILES_PARSER	getParser()
org.openscience.cdk.interfaces.IMolecule	parseSmiles(java.lang.String smiles)
void	propertyChange(java.beans.PropertyChangeEvent evt)
void	setParser(SmilesParserWrapper.SMILES_PARSER parser)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

wrapper

protected static SmilesParserWrapper wrapper

babel

protected OpenBabelShell babel

cdkParser

protected org.openscience.cdk.smiles.SmilesParser cdkParser

dbt

protected DeduceBondSystemTool dbt

parser

protected SmilesParserWrapper.SMILES_PARSER parser

Constructor Detail

SmilesParserWrapper

protected SmilesParserWrapper()

SmilesParserWrapper

protected SmilesParserWrapper(SmilesParserWrapper.SMILES_PARSER mode)

Method Detail

parseSmiles

public org.openscience.cdk.interfaces.IMolecule parseSmiles(java.lang.String smiles)
                                                     throws org.openscience.cdk.exception.InvalidSmilesException

Throws:

org.openscience.cdk.exception.InvalidSmilesException

getParser

public SmilesParserWrapper.SMILES_PARSER getParser()

setParser

public void setParser(SmilesParserWrapper.SMILES_PARSER parser)

getInstance

public static SmilesParserWrapper getInstance(SmilesParserWrapper.SMILES_PARSER mode)

getInstance

public static SmilesParserWrapper getInstance()

propertyChange

public void propertyChange(java.beans.PropertyChangeEvent evt)

Specified by:

propertyChange in interface java.beans.PropertyChangeListener