ambit2.core.io

Class ArffWriter

java.lang.Object

org.openscience.cdk.io.ChemObjectIO

org.openscience.cdk.io.DefaultChemObjectWriter

ambit2.core.io.FilesWithHeaderWriter

ambit2.core.io.ArffWriter

All Implemented Interfaces:

Closeable, AutoCloseable, org.openscience.cdk.io.IChemObjectIO, org.openscience.cdk.io.IChemObjectWriter

public class ArffWriter
extends FilesWithHeaderWriter

Field Summary

Fields

Modifier and Type	Field and Description
protected BufferedWriter	writer

Fields inherited from class ambit2.core.io.FilesWithHeaderWriter

addSMILEScolumn, defaultSMILESHeader, header, logger, smilesIndex, writingStarted

Constructor Summary

Constructors

Constructor and Description
ArffWriter(Writer out)

Method Summary

Modifier and Type	Method and Description
boolean	accepts(Class arg0)
void	close()
org.openscience.cdk.io.formats.IResourceFormat	getFormat()
void	setWriter(OutputStream out)
void	setWriter(Writer arg0)
void	write(org.openscience.cdk.interfaces.IChemObject mol)
protected void	writeHeader()

Methods inherited from class ambit2.core.io.FilesWithHeaderWriter

getHeader, isAddSMILEScolumn, setAddSMILEScolumn, setHeader, setHeader

Methods inherited from class org.openscience.cdk.io.ChemObjectIO

addChemObjectIOListener, addSetting, addSettings, fireIOSettingQuestion, getIOSettings, getListeners, getSetting, getSetting, getSettings, hasSetting, removeChemObjectIOListener

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface org.openscience.cdk.io.IChemObjectIO

addChemObjectIOListener, addSetting, addSettings, getIOSettings, getListeners, getSetting, getSetting, getSettings, hasSetting, removeChemObjectIOListener

Field Detail

writer

protected BufferedWriter writer

Constructor Detail

ArffWriter

public ArffWriter(Writer out)

Method Detail

writeHeader

protected void writeHeader()
                    throws IOException

Specified by:

writeHeader in class FilesWithHeaderWriter

Throws:

IOException

setWriter

public void setWriter(Writer arg0)
               throws org.openscience.cdk.exception.CDKException

Throws:

org.openscience.cdk.exception.CDKException

setWriter

public void setWriter(OutputStream out)
               throws org.openscience.cdk.exception.CDKException

Throws:

org.openscience.cdk.exception.CDKException

write

public void write(org.openscience.cdk.interfaces.IChemObject mol)
           throws org.openscience.cdk.exception.CDKException

Throws:

org.openscience.cdk.exception.CDKException

accepts

public boolean accepts(Class arg0)

close

public void close()
           throws IOException

Throws:

IOException

getFormat

public org.openscience.cdk.io.formats.IResourceFormat getFormat()