Hierarchy For Package ambit2.core.io

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • org.openscience.cdk.io.ChemObjectIO (implements org.openscience.cdk.io.IChemObjectIO)
    • org.openscience.cdk.io.DefaultChemObjectReader (implements org.openscience.cdk.io.ISimpleChemObjectReader)
      • ambit2.core.io.DelimitedFileReader (implements org.openscience.cdk.io.IChemObjectReader)
      • ambit2.core.io.MDLReader
      • org.openscience.cdk.io.MDLReader
        • ambit2.core.io.FilteredMDLReader
    • org.openscience.cdk.io.DefaultChemObjectWriter (implements org.openscience.cdk.io.IChemObjectWriter)
      • ambit2.core.io.FilesWithHeaderWriter
        • ambit2.core.io.ArffWriter
        • ambit2.core.io.DelimitedFileWriter
        • ambit2.core.io.PDFWriter
      • ambit2.core.io.FileWithHeaderWriter
        • ambit2.core.io.XLSFileWriter
    • org.openscience.cdk.io.iterator.DefaultIteratingChemObjectReader<T> (implements org.openscience.cdk.io.iterator.IIteratingChemObjectReader<T>)
      • ambit2.core.io.ECHAPreregistrationListReader (implements ambit2.core.io.IRawReader<T>)
      • ambit2.core.io.I5ReaderSimple (implements ambit2.base.interfaces.ICiteable, ambit2.core.io.IRawReader<T>)
      • ambit2.core.io.IteratingChemObjectReaderWrapper
      • ambit2.core.io.IteratingFilesWithHeaderReader<COLUMN>
        • ambit2.core.io.IteratingDelimitedFileReaderComplexHeader<COLUMN>
          • ambit2.core.io.IteratingDelimitedFileReader (implements org.openscience.cdk.io.iterator.IIteratingChemObjectReader<T>)
            • ambit2.core.io.ToxcastAssayReader
        • ambit2.core.io.IteratingXLSReader
      • ambit2.core.io.IteratingFolderReader<T,ItemReader>
        • ambit2.core.io.IteratingMolFolderReader
        • ambit2.core.io.RawIteratingFolderReader (implements ambit2.core.io.IRawReader<T>)
          • ambit2.core.io.ZipReader<OPTIONS>
      • org.openscience.cdk.io.iterator.IteratingSDFReader
        • ambit2.core.io.InteractiveIteratingMDLReader
      • ambit2.core.io.RawIteratingCSVReader (implements ambit2.base.interfaces.ICiteable, ambit2.core.io.IRawReader<T>)
      • ambit2.core.io.RawIteratingReader<T> (implements ambit2.base.interfaces.ICiteable, ambit2.core.io.IRawReader<T>)
        • ambit2.core.io.RawIteratingMOLReader
        • ambit2.core.io.RawIteratingSDFReader
      • ambit2.core.io.ToXMLReaderSimple (implements ambit2.core.io.IRawReader<T>)
  • ambit2.core.io.DelimitedFileFormat (implements org.openscience.cdk.io.formats.IChemFormatMatcher)
    • ambit2.core.io.ToxcastFileFormat
  • ambit2.core.io.FileState (implements ambit2.base.interfaces.IInputOutputState)
    • ambit2.core.io.FileInputState (implements ambit2.core.io.IInputState)
    • ambit2.core.io.FileOutputState (implements ambit2.core.io.IOutputState)
  • org.openscience.cdk.io.setting.IOSetting (implements org.openscience.cdk.interfaces.ISetting)
    • ambit2.core.io.MolPropertiesIOSetting
  • ambit2.core.io.IteratingFileReader (implements org.openscience.cdk.io.iterator.IIteratingChemObjectReader<T>)
  • ambit2.core.io.QuotedTokenizer
  • ambit2.core.io.RawIteratingWrapper<R> (implements ambit2.base.interfaces.ICiteable, ambit2.core.io.IRawReader<T>)
  • java.io.Reader (implements java.io.Closeable, java.lang.Readable)
    • java.io.FilterReader
      • ambit2.core.io.MultiNewlineFilterReader
  • ambit2.core.io.SDFBrokenLineTerminationConverter
  • ambit2.core.io.SGroupMDL2000Helper
  • ambit2.core.io.SimpleIOListener (implements org.openscience.cdk.io.listener.IReaderListener, org.openscience.cdk.io.listener.IWriterListener)
  • ambit2.core.io.StringArrayHeader<CATEGORIES>
  • ambit2.core.io.XLSFileFormat (implements org.openscience.cdk.io.formats.IChemFormatMatcher)

Interface Hierarchy

• java.lang.AutoCloseable
  • java.io.Closeable
    • org.openscience.cdk.io.IChemObjectIO
      • org.openscience.cdk.io.IChemObjectReader
        • org.openscience.cdk.io.iterator.IIteratingChemObjectReader<T> (also extends java.util.Iterator<E>)
          • ambit2.core.io.IRawReader<T>
• ambit2.core.io.ICompoundImageTools
• java.util.Iterator<E>
  • org.openscience.cdk.io.iterator.IIteratingChemObjectReader<T> (also extends org.openscience.cdk.io.IChemObjectReader)
    • ambit2.core.io.IRawReader<T>
• java.io.Serializable
  • ambit2.base.interfaces.IInputOutputState
    • ambit2.core.io.IInputState
    • ambit2.core.io.IOutputState

Enum Hierarchy

• java.lang.Object
  • java.lang.Enum<E> (implements java.lang.Comparable<T>, java.io.Serializable)
    • ambit2.core.io.SGroupMDL2000Helper.SGROUP_CONNECTIVITY
    • ambit2.core.io.FileState._FILE_TYPE
    • ambit2.core.io.ECHAPreregistrationListReader.echa_tags
    • ambit2.core.io.I5ReaderSimple.i5_refs_attr
    • ambit2.core.io.ToXMLReaderSimple.toxml_tags
    • ambit2.core.io.ToXMLReaderSimple.toxml_tags_level1
    • ambit2.core.io.ToXMLReaderSimple.toxml_names
    • ambit2.core.io.SGroupMDL2000Helper.SGROUP_LINE
    • ambit2.core.io.I5ReaderSimple.i5_tags
    • ambit2.core.io.ToXMLReaderSimple.toxml_quantity_types
    • ambit2.core.io.ToXMLReaderSimple.toxml_attributes
    • ambit2.core.io.RawIteratingFolderReader.FileNameMode
    • ambit2.core.io.SGroupMDL2000Helper.SGROUP_TYPE
    • ambit2.core.io.SGroupMDL2000Helper.SGROUP_POLYMER_TYPE