ambit2.db.readers

Class RetrieveProfileValues

java.lang.Object

ambit2.db.search.AbstractQuery<Profile<Property>,IStructureRecord,net.idea.modbcum.q.conditions.SetCondition,IStructureRecord>

ambit2.db.readers.RetrieveProfileValues

All Implemented Interfaces:

Serializable, net.idea.modbcum.i.IMultiRetrieval<IStructureRecord>, net.idea.modbcum.i.IParameterizedQuery<Profile<Property>,IStructureRecord,net.idea.modbcum.q.conditions.SetCondition>, net.idea.modbcum.i.IQueryObject<IStructureRecord>, net.idea.modbcum.i.IQueryRetrieval<IStructureRecord>, net.idea.modbcum.i.IRetrieval<IStructureRecord>, net.idea.modbcum.i.IStatement

public class RetrieveProfileValues
extends AbstractQuery<Profile<Property>,IStructureRecord,net.idea.modbcum.q.conditions.SetCondition,IStructureRecord>
implements net.idea.modbcum.i.IQueryRetrieval<IStructureRecord>, net.idea.modbcum.i.IMultiRetrieval<IStructureRecord>

See Also:

Serialized Form

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	RetrieveProfileValues.SearchMode

Field Summary

Fields

Modifier and Type	Field and Description
protected boolean	addNew
protected boolean	chemicalsOnly
static String	NaN
protected IStructureRecord	record
protected RetrieveProfileValues.SearchMode	searchMode
protected String	sql_alias
protected String	sql_chemical
protected String	sql_chemical_novalue
protected String	sql_name
protected String	sql_propery
protected String	sql_structure
protected String	sql_structure_novalue

Fields inherited from class ambit2.db.search.AbstractQuery

condition, fieldname, id, logger, maxRecords, name, page, selected, value

Constructor Summary

Constructors

Constructor and Description
RetrieveProfileValues()
RetrieveProfileValues(RetrieveProfileValues.SearchMode querymode, Profile profile, boolean chemicalsOnly)

Method Summary

Modifier and Type	Method and Description
double	calculateMetric(IStructureRecord object)
IStructureRecord	getMultiObject(ResultSet rs)
IStructureRecord	getObject(ResultSet rs)
protected IStructureRecord	getObject(ResultSet rs, IStructureRecord record, int idstructure)
List<net.idea.modbcum.i.query.QueryParam>	getParameters()
protected String	getPropertyWhere()
IStructureRecord	getRecord()
RetrieveProfileValues.SearchMode	getSearchMode()
String	getSQL()
boolean	isAddNew()
boolean	isChemicalsOnly()
boolean	isPrescreen()
boolean	isSearchByAlias()
boolean	isSearchByID()
protected Property	retrieveProperty(ResultSet rs)
protected void	retrieveValue(ResultSet rs, IStructureRecord record, Property p)
void	setAddNew(boolean addNew)
void	setChemicalsOnly(boolean chemicalsOnly)
void	setRecord(IStructureRecord record)
void	setSearchByAlias(boolean value)
void	setSearchByID(boolean value)
void	setSearchMode(RetrieveProfileValues.SearchMode searchMode)
protected String	sql()

Methods inherited from class ambit2.db.search.AbstractQuery

getCategory, getCondition, getFieldname, getId, getKey, getName, getPage, getPageSize, getValue, isSelected, setCondition, setFieldname, setId, setName, setPage, setPageSize, setSelected, setValue, stringify, supportsPaging, test, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface net.idea.modbcum.i.IQueryObject

getCategory, getId, getKey, getPage, getPageSize, setId, setPage, setPageSize, supportsPaging

Field Detail

NaN

public static final String NaN

See Also:

Constant Field Values

record

protected IStructureRecord record

addNew

protected boolean addNew

searchMode

protected RetrieveProfileValues.SearchMode searchMode

chemicalsOnly

protected boolean chemicalsOnly

sql_structure

protected final String sql_structure

See Also:

Constant Field Values

sql_structure_novalue

protected final String sql_structure_novalue

See Also:

Constant Field Values

sql_chemical

protected final String sql_chemical

See Also:

Constant Field Values

sql_chemical_novalue

protected final String sql_chemical_novalue

See Also:

Constant Field Values

sql_propery

protected final String sql_propery

See Also:

Constant Field Values

sql_alias

protected final String sql_alias

See Also:

Constant Field Values

sql_name

protected final String sql_name

See Also:

Constant Field Values

Constructor Detail

RetrieveProfileValues

public RetrieveProfileValues()

RetrieveProfileValues

public RetrieveProfileValues(RetrieveProfileValues.SearchMode querymode,
                             Profile profile,
                             boolean chemicalsOnly)

Method Detail

getRecord

public IStructureRecord getRecord()

setRecord

public void setRecord(IStructureRecord record)

isAddNew

public boolean isAddNew()

setAddNew

public void setAddNew(boolean addNew)

getSearchMode

public RetrieveProfileValues.SearchMode getSearchMode()

setSearchMode

public void setSearchMode(RetrieveProfileValues.SearchMode searchMode)

isChemicalsOnly

public boolean isChemicalsOnly()

setChemicalsOnly

public void setChemicalsOnly(boolean chemicalsOnly)

isSearchByAlias

public boolean isSearchByAlias()

setSearchByAlias

public void setSearchByAlias(boolean value)

isSearchByID

public boolean isSearchByID()

setSearchByID

public void setSearchByID(boolean value)

sql

protected String sql()

Returns:

getPropertyWhere

protected String getPropertyWhere()

getSQL

public String getSQL()
              throws net.idea.modbcum.i.exceptions.AmbitException

Specified by:

getSQL in interface net.idea.modbcum.i.IQueryObject<IStructureRecord>

Throws:

net.idea.modbcum.i.exceptions.AmbitException

getParameters

public List<net.idea.modbcum.i.query.QueryParam> getParameters()
                                                        throws net.idea.modbcum.i.exceptions.AmbitException

Specified by:

getParameters in interface net.idea.modbcum.i.IQueryObject<IStructureRecord>

Throws:

net.idea.modbcum.i.exceptions.AmbitException

getMultiObject

public IStructureRecord getMultiObject(ResultSet rs)
                                throws net.idea.modbcum.i.exceptions.AmbitException

Specified by:

getMultiObject in interface net.idea.modbcum.i.IMultiRetrieval<IStructureRecord>

Throws:

net.idea.modbcum.i.exceptions.AmbitException

getObject

public IStructureRecord getObject(ResultSet rs)
                           throws net.idea.modbcum.i.exceptions.AmbitException

Specified by:

getObject in interface net.idea.modbcum.i.IRetrieval<IStructureRecord>

Throws:

net.idea.modbcum.i.exceptions.AmbitException

getObject

protected IStructureRecord getObject(ResultSet rs,
                                     IStructureRecord record,
                                     int idstructure)
                              throws net.idea.modbcum.i.exceptions.AmbitException

Throws:

net.idea.modbcum.i.exceptions.AmbitException

retrieveValue

protected void retrieveValue(ResultSet rs,
                             IStructureRecord record,
                             Property p)
                      throws net.idea.modbcum.i.exceptions.AmbitException

Throws:

net.idea.modbcum.i.exceptions.AmbitException

retrieveProperty

protected Property retrieveProperty(ResultSet rs)
                             throws net.idea.modbcum.i.exceptions.AmbitException

Throws:

net.idea.modbcum.i.exceptions.AmbitException

calculateMetric

public double calculateMetric(IStructureRecord object)

Specified by:

calculateMetric in interface net.idea.modbcum.i.IQueryRetrieval<IStructureRecord>

isPrescreen

public boolean isPrescreen()

Specified by:

isPrescreen in interface net.idea.modbcum.i.IQueryRetrieval<IStructureRecord>