ambit2.rest.rdf.sparql

Class RDFCompoundIterator

java.lang.Object

ambit2.rest.rdf.sparql.RDFSparqlIterator<COMPOUND>

ambit2.rest.rdf.sparql.RDFAbstractCompoundIterator<IStructureRecord,Property>

ambit2.rest.rdf.sparql.RDFCompoundIterator

All Implemented Interfaces:

Iterator<IStructureRecord>

public class RDFCompoundIterator
extends RDFAbstractCompoundIterator<IStructureRecord,Property>

Field Summary

Fields inherited from class ambit2.rest.rdf.sparql.RDFAbstractCompoundIterator

compoundTemplate, conformerTemplate, lookup, sparql

Fields inherited from class ambit2.rest.rdf.sparql.RDFSparqlIterator

baseReference, jenaModel, nextRecord, nextRecordNode, qe, record, recordIDVar, recordNode, reference, referer, resultSet

Constructor Summary

Constructors

Constructor and Description
RDFCompoundIterator(InputStream in, org.restlet.data.MediaType mediaType)
RDFCompoundIterator(com.hp.hpl.jena.ontology.OntModel model, String sparql)
RDFCompoundIterator(org.restlet.data.Reference reference, org.restlet.data.MediaType mediaType, String referer)
RDFCompoundIterator(org.restlet.data.Reference reference, String referer)
RDFCompoundIterator(org.restlet.representation.Representation representation, org.restlet.data.MediaType mediaType)

Method Summary

Modifier and Type	Method and Description
protected RDFAbstractFeatureIterator<Property>	getPropertyIterator(com.hp.hpl.jena.rdf.model.Model jenaModel)
protected IStructureRecord	newCompound(com.hp.hpl.jena.rdf.model.RDFNode node)
protected Property	newProperty(com.hp.hpl.jena.rdf.model.RDFNode node)
protected void	setCompoundIDS(IStructureRecord compound, int idchemical, int idstructure)
protected void	setValue(IStructureRecord record, Property property, double value)
protected void	setValue(IStructureRecord record, Property property, float value)
protected void	setValue(IStructureRecord record, Property property, int value)
protected void	setValue(IStructureRecord record, Property property, String value)

Methods inherited from class ambit2.rest.rdf.sparql.RDFAbstractCompoundIterator

getProperty, parse, setBaseReference

Methods inherited from class ambit2.rest.rdf.sparql.RDFSparqlIterator

close, finalize, getBaseReference, getJenaModel, getRecordURI, hasNext, isSameRecord, next, remove

Methods inherited from class java.lang.Object

clone, equals, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Iterator

forEachRemaining

Constructor Detail

RDFCompoundIterator

public RDFCompoundIterator(org.restlet.representation.Representation representation,
                           org.restlet.data.MediaType mediaType)
                    throws org.restlet.resource.ResourceException,
                           MalformedURLException,
                           IOException

Throws:

org.restlet.resource.ResourceException

MalformedURLException

IOException

RDFCompoundIterator

public RDFCompoundIterator(org.restlet.data.Reference reference,
                           String referer)
                    throws org.restlet.resource.ResourceException,
                           MalformedURLException,
                           IOException

Throws:

org.restlet.resource.ResourceException

MalformedURLException

IOException

RDFCompoundIterator

public RDFCompoundIterator(org.restlet.data.Reference reference,
                           org.restlet.data.MediaType mediaType,
                           String referer)
                    throws org.restlet.resource.ResourceException,
                           MalformedURLException,
                           IOException

Throws:

org.restlet.resource.ResourceException

MalformedURLException

IOException

RDFCompoundIterator

public RDFCompoundIterator(InputStream in,
                           org.restlet.data.MediaType mediaType)
                    throws org.restlet.resource.ResourceException,
                           MalformedURLException,
                           IOException

Throws:

org.restlet.resource.ResourceException

MalformedURLException

IOException

RDFCompoundIterator

public RDFCompoundIterator(com.hp.hpl.jena.ontology.OntModel model,
                           String sparql)
                    throws org.restlet.resource.ResourceException,
                           MalformedURLException,
                           IOException

Throws:

org.restlet.resource.ResourceException

MalformedURLException

IOException

Method Detail

getPropertyIterator

protected RDFAbstractFeatureIterator<Property> getPropertyIterator(com.hp.hpl.jena.rdf.model.Model jenaModel)

Specified by:

getPropertyIterator in class RDFAbstractCompoundIterator<IStructureRecord,Property>

setCompoundIDS

protected void setCompoundIDS(IStructureRecord compound,
                              int idchemical,
                              int idstructure)

newProperty

protected Property newProperty(com.hp.hpl.jena.rdf.model.RDFNode node)

Specified by:

newProperty in class RDFAbstractCompoundIterator<IStructureRecord,Property>

setValue

protected void setValue(IStructureRecord record,
                        Property property,
                        double value)

Specified by:

setValue in class RDFAbstractCompoundIterator<IStructureRecord,Property>

setValue

protected void setValue(IStructureRecord record,
                        Property property,
                        float value)

Specified by:

setValue in class RDFAbstractCompoundIterator<IStructureRecord,Property>

setValue

protected void setValue(IStructureRecord record,
                        Property property,
                        int value)

Specified by:

setValue in class RDFAbstractCompoundIterator<IStructureRecord,Property>

setValue

protected void setValue(IStructureRecord record,
                        Property property,
                        String value)

Specified by:

setValue in class RDFAbstractCompoundIterator<IStructureRecord,Property>

newCompound

protected IStructureRecord newCompound(com.hp.hpl.jena.rdf.model.RDFNode node)

Specified by:

newCompound in class RDFAbstractCompoundIterator<IStructureRecord,Property>