ambit2.sln

Class SLNConst

java.lang.Object

ambit2.sln.SLNConst

public class SLNConst
extends Object

Field Summary

Fields

Modifier and Type	Field and Description
static int	A_ATTR_charge
static int	A_ATTR_fcharge
static int	A_ATTR_I
static int	A_ATTR_s
static int	A_ATTR_spin
static int	A_ATTR_USER_DEFINED
static int	A_spin_d
static int	A_spin_s
static int	A_spin_t
static int	A_STEREO_D
static int	A_STEREO_D_
static int	A_STEREO_DE
static int	A_STEREO_DM
static int	A_STEREO_E
static int	A_STEREO_I
static int	A_STEREO_I_
static int	A_STEREO_IE
static int	A_STEREO_IM
static int	A_STEREO_L
static int	A_STEREO_L_
static int	A_STEREO_LE
static int	A_STEREO_LM
static int	A_STEREO_M
static int	A_STEREO_N
static int	A_STEREO_N_
static int	A_STEREO_NE
static int	A_STEREO_NM
static int	A_STEREO_R
static int	A_STEREO_R_
static int	A_STEREO_RE
static int	A_STEREO_Rel
static int	A_STEREO_RM
static int	A_STEREO_S
static int	A_STEREO_S_
static int	A_STEREO_SE
static int	A_STEREO_SM
static int	A_STEREO_U
static int	A_STEREO_U_
static int	A_STEREO_UE
static int	A_STEREO_UM
static int	B_ATTR_s
static int	B_ATTR_USER_DEFINED
static int	B_STEREO_C
static int	B_STEREO_E
static int	B_STEREO_I
static int	B_STEREO_N
static int	B_STEREO_T
static int	B_STEREO_U
static int	B_STEREO_U_
static int	B_STEREO_Z
static int	B_TYPE_1
static int	B_TYPE_2
static int	B_TYPE_3
static int	B_TYPE_ANY
static int	B_TYPE_aromatic
static int	B_TYPE_USER_DEFINED
static int	CO_DIFFERS
static int	CO_EQUALS
static int	CO_GREATER_OR_EQUALS
static int	CO_GREATER_THAN
static int	CO_LESS_OR_EQUALS
static int	CO_LESS_THAN
static int	CO_NO_COMPARISON
static String	CoveredAtomProperty
static String[]	elSymbols
static int	GlobalDictOffseet
static int	LO
static int	LO_AND
static int	LO_ANDLO
static int	LO_NOT
static int	LO_OR
static int	LocalDictOffseet
static int[][]	priority
static int	QA_ATTR_c
static int	QA_ATTR_f
static int	QA_ATTR_hac
static int	QA_ATTR_hc
static int	QA_ATTR_htc
static int	QA_ATTR_is
static int	QA_ATTR_mapNum
static int	QA_ATTR_mw
static int	QA_ATTR_n
static int	QA_ATTR_not
static int	QA_ATTR_ntc
static int	QA_ATTR_r
static int	QA_ATTR_rbc
static int	QA_ATTR_src
static int	QA_ATTR_tac
static int	QA_ATTR_tbo
static int	QA_ATTR_type
static int	QA_ATTR_v
static int	QA_COVERED_n
static int	QA_COVERED_o
static int	QA_COVERED_y
static int	QB_ATTR_r
static int	QB_ATTR_rbc
static int	QB_ATTR_src
static int	QB_ATTR_type

Constructor Summary

Constructors

Constructor and Description
SLNConst()

Method Summary

Modifier and Type	Method and Description
static String	atomAttributeToSLNString(int attr)
static String	atomSpinAttrToSLNString(int attr)
static String	atomStereoChemAttrToSLNString(int attr)
static String	bondAttributeToSLNString(int attr)
static String	bondStereoChemistryAttributeToSLNString(int attr)
static String	bondTypeAttributeToSLNString(int attr)
static String	bondTypeAttributeToSLNString(int attr, boolean FlagDefaultSingleBond)
static boolean	compare(double v1, double v2, int compOp)
static boolean	compare(int v1, int v2, int compOp)
static boolean	compare(String v1, String v2, int compOp)
static boolean	compareIgnoreCase(String v1, String v2, int compOp)
static String	comparisonOperationToSLNString(int compOp)
static String	coverageQueryAttributeToSLNString(int attr)
static int	SLNCharToBondTypeAttr(char symbol)
static int	SLNStringToAtomStereoChemAttr(String stereo)
static int	SLNStringToBondStereoChemAttr(String type)
static int	SLNStringToBondTypeAttr(String type)
static int	SLNStringToComparisonOperation(String compOpStr)
static int	SLNStringToCoverageQueryAttr(String c)
static int	SLNStringToSpinAttr(String spin)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

LO_NOT

public static final int LO_NOT

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Constant Field Values

LO_AND

public static final int LO_AND

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LO_OR

public static final int LO_OR

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LO_ANDLO

public static final int LO_ANDLO

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LO

public static final int LO

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Constant Field Values

A_ATTR_charge

public static final int A_ATTR_charge

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A_ATTR_I

public static final int A_ATTR_I

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A_ATTR_fcharge

public static final int A_ATTR_fcharge

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A_ATTR_s

public static final int A_ATTR_s

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A_ATTR_spin

public static final int A_ATTR_spin

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A_ATTR_USER_DEFINED

public static final int A_ATTR_USER_DEFINED

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QA_ATTR_mapNum

public static final int QA_ATTR_mapNum

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QA_ATTR_c

public static final int QA_ATTR_c

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QA_ATTR_f

public static final int QA_ATTR_f

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QA_ATTR_is

public static final int QA_ATTR_is

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QA_ATTR_n

public static final int QA_ATTR_n

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QA_ATTR_not

public static final int QA_ATTR_not

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QA_ATTR_r

public static final int QA_ATTR_r

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QA_ATTR_v

public static final int QA_ATTR_v

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QA_ATTR_hac

public static final int QA_ATTR_hac

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QA_ATTR_hc

public static final int QA_ATTR_hc

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QA_ATTR_htc

public static final int QA_ATTR_htc

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QA_ATTR_ntc

public static final int QA_ATTR_ntc

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QA_ATTR_tac

public static final int QA_ATTR_tac

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QA_ATTR_tbo

public static final int QA_ATTR_tbo

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QA_ATTR_rbc

public static final int QA_ATTR_rbc

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QA_ATTR_src

public static final int QA_ATTR_src

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QA_ATTR_mw

public static final int QA_ATTR_mw

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QA_ATTR_type

public static final int QA_ATTR_type

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A_STEREO_R

public static final int A_STEREO_R

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A_STEREO_S

public static final int A_STEREO_S

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A_STEREO_N

public static final int A_STEREO_N

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A_STEREO_I

public static final int A_STEREO_I

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A_STEREO_D

public static final int A_STEREO_D

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A_STEREO_L

public static final int A_STEREO_L

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A_STEREO_U

public static final int A_STEREO_U

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A_STEREO_E

public static final int A_STEREO_E

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A_STEREO_Rel

public static final int A_STEREO_Rel

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A_STEREO_M

public static final int A_STEREO_M

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A_STEREO_RE

public static final int A_STEREO_RE

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A_STEREO_SE

public static final int A_STEREO_SE

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A_STEREO_DE

public static final int A_STEREO_DE

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A_STEREO_LE

public static final int A_STEREO_LE

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A_STEREO_NE

public static final int A_STEREO_NE

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A_STEREO_IE

public static final int A_STEREO_IE

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A_STEREO_UE

public static final int A_STEREO_UE

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A_STEREO_R_

public static final int A_STEREO_R_

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A_STEREO_S_

public static final int A_STEREO_S_

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A_STEREO_D_

public static final int A_STEREO_D_

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A_STEREO_L_

public static final int A_STEREO_L_

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A_STEREO_N_

public static final int A_STEREO_N_

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A_STEREO_I_

public static final int A_STEREO_I_

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A_STEREO_U_

public static final int A_STEREO_U_

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A_STEREO_RM

public static final int A_STEREO_RM

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A_STEREO_SM

public static final int A_STEREO_SM

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A_STEREO_DM

public static final int A_STEREO_DM

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A_STEREO_LM

public static final int A_STEREO_LM

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A_STEREO_NM

public static final int A_STEREO_NM

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A_STEREO_IM

public static final int A_STEREO_IM

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A_STEREO_UM

public static final int A_STEREO_UM

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A_spin_s

public static final int A_spin_s

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A_spin_d

public static final int A_spin_d

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A_spin_t

public static final int A_spin_t

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QA_COVERED_n

public static final int QA_COVERED_n

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QA_COVERED_o

public static final int QA_COVERED_o

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QA_COVERED_y

public static final int QA_COVERED_y

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CoveredAtomProperty

public static final String CoveredAtomProperty

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B_ATTR_s

public static final int B_ATTR_s

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B_ATTR_USER_DEFINED

public static final int B_ATTR_USER_DEFINED

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QB_ATTR_src

public static final int QB_ATTR_src

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QB_ATTR_type

public static final int QB_ATTR_type

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QB_ATTR_r

public static final int QB_ATTR_r

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QB_ATTR_rbc

public static final int QB_ATTR_rbc

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B_TYPE_ANY

public static final int B_TYPE_ANY

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B_TYPE_1

public static final int B_TYPE_1

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B_TYPE_2

public static final int B_TYPE_2

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B_TYPE_3

public static final int B_TYPE_3

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B_TYPE_aromatic

public static final int B_TYPE_aromatic

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B_TYPE_USER_DEFINED

public static final int B_TYPE_USER_DEFINED

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B_STEREO_C

public static final int B_STEREO_C

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B_STEREO_T

public static final int B_STEREO_T

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B_STEREO_E

public static final int B_STEREO_E

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B_STEREO_Z

public static final int B_STEREO_Z

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B_STEREO_N

public static final int B_STEREO_N

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B_STEREO_I

public static final int B_STEREO_I

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B_STEREO_U

public static final int B_STEREO_U

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B_STEREO_U_

public static final int B_STEREO_U_

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CO_EQUALS

public static final int CO_EQUALS

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CO_LESS_THAN

public static final int CO_LESS_THAN

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CO_LESS_OR_EQUALS

public static final int CO_LESS_OR_EQUALS

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CO_GREATER_THAN

public static final int CO_GREATER_THAN

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CO_GREATER_OR_EQUALS

public static final int CO_GREATER_OR_EQUALS

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CO_DIFFERS

public static final int CO_DIFFERS

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CO_NO_COMPARISON

public static final int CO_NO_COMPARISON

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priority

public static int[][] priority

GlobalDictOffseet

public static final int GlobalDictOffseet

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Constant Field Values

LocalDictOffseet

public static final int LocalDictOffseet

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Constant Field Values

elSymbols

public static final String[] elSymbols

Constructor Detail

SLNConst

public SLNConst()

Method Detail

atomAttributeToSLNString

public static String atomAttributeToSLNString(int attr)

atomStereoChemAttrToSLNString

public static String atomStereoChemAttrToSLNString(int attr)

SLNStringToAtomStereoChemAttr

public static int SLNStringToAtomStereoChemAttr(String stereo)

atomSpinAttrToSLNString

public static String atomSpinAttrToSLNString(int attr)

SLNStringToSpinAttr

public static int SLNStringToSpinAttr(String spin)

coverageQueryAttributeToSLNString

public static String coverageQueryAttributeToSLNString(int attr)

SLNStringToCoverageQueryAttr

public static int SLNStringToCoverageQueryAttr(String c)

bondAttributeToSLNString

public static String bondAttributeToSLNString(int attr)

bondTypeAttributeToSLNString

public static String bondTypeAttributeToSLNString(int attr)

bondTypeAttributeToSLNString

public static String bondTypeAttributeToSLNString(int attr,
                                                  boolean FlagDefaultSingleBond)

SLNStringToBondTypeAttr

public static int SLNStringToBondTypeAttr(String type)

SLNCharToBondTypeAttr

public static int SLNCharToBondTypeAttr(char symbol)

bondStereoChemistryAttributeToSLNString

public static String bondStereoChemistryAttributeToSLNString(int attr)

SLNStringToBondStereoChemAttr

public static int SLNStringToBondStereoChemAttr(String type)

SLNStringToComparisonOperation

public static int SLNStringToComparisonOperation(String compOpStr)

comparisonOperationToSLNString

public static String comparisonOperationToSLNString(int compOp)

compare

public static boolean compare(int v1,
                              int v2,
                              int compOp)

compare

public static boolean compare(double v1,
                              double v2,
                              int compOp)

compare

public static boolean compare(String v1,
                              String v2,
                              int compOp)

compareIgnoreCase

public static boolean compareIgnoreCase(String v1,
                                        String v2,
                                        int compOp)