ambit2.core.io
Class PDFWriter

java.lang.Object
  org.openscience.cdk.io.DefaultChemObjectWriter
      ambit2.core.io.FilesWithHeaderWriter
          ambit2.core.io.PDFWriter

All Implemented Interfaces:

org.openscience.cdk.io.IChemObjectIO, org.openscience.cdk.io.IChemObjectWriter

public class PDFWriter
extends FilesWithHeaderWriter

Exporting set of structures as PDF file.

Field Summary

protected java.awt.Dimension	cell
protected CompoundImageTools	imageTools
protected com.lowagie.text.Document	pdfDoc
protected com.lowagie.text.pdf.PdfWriter	pdfWriter
protected com.lowagie.text.pdf.PdfPTable	table

Fields inherited from class ambit2.core.io.FilesWithHeaderWriter

defaultSMILESHeader, header, logger, smilesIndex, writingStarted

Constructor Summary

PDFWriter(java.io.OutputStream outputStream)

Method Summary

boolean	accepts(java.lang.Class classObject)
void	close()
org.openscience.cdk.io.formats.IResourceFormat	getFormat()
int	getSupportedDataFeatures()
void	setWriter(java.io.OutputStream out)
void	setWriter(java.io.Writer arg0)
void	write(org.openscience.cdk.interfaces.IChemObject object)
protected void	writeHeader()
void	writeMolecule(org.openscience.cdk.interfaces.IMolecule molecule)
void	writeSetOfMolecules(org.openscience.cdk.interfaces.IMoleculeSet som)

Methods inherited from class ambit2.core.io.FilesWithHeaderWriter

getHeader, setHeader, setHeader

Methods inherited from class org.openscience.cdk.io.DefaultChemObjectWriter

addChemObjectIOListener, fireIOSettingQuestion, getIOSettings, removeChemObjectIOListener

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

pdfDoc

protected com.lowagie.text.Document pdfDoc

pdfWriter

protected com.lowagie.text.pdf.PdfWriter pdfWriter

table

protected com.lowagie.text.pdf.PdfPTable table

imageTools

protected CompoundImageTools imageTools

cell

protected java.awt.Dimension cell

Constructor Detail

PDFWriter

public PDFWriter(java.io.OutputStream outputStream)
          throws org.openscience.cdk.exception.CDKException

Throws:

org.openscience.cdk.exception.CDKException

Method Detail

setWriter

public void setWriter(java.io.Writer arg0)
               throws org.openscience.cdk.exception.CDKException

Throws:

org.openscience.cdk.exception.CDKException

setWriter

public void setWriter(java.io.OutputStream out)
               throws org.openscience.cdk.exception.CDKException

Throws:

org.openscience.cdk.exception.CDKException

write

public void write(org.openscience.cdk.interfaces.IChemObject object)
           throws org.openscience.cdk.exception.CDKException

Throws:

org.openscience.cdk.exception.CDKException

accepts

public boolean accepts(java.lang.Class classObject)

getSupportedDataFeatures

public int getSupportedDataFeatures()

close

public void close()
           throws java.io.IOException

Throws:

java.io.IOException

getFormat

public org.openscience.cdk.io.formats.IResourceFormat getFormat()

writeHeader

protected void writeHeader()
                    throws java.io.IOException

Specified by:

writeHeader in class FilesWithHeaderWriter

Throws:

java.io.IOException

writeSetOfMolecules

public void writeSetOfMolecules(org.openscience.cdk.interfaces.IMoleculeSet som)

writeMolecule

public void writeMolecule(org.openscience.cdk.interfaces.IMolecule molecule)