Uses of Class
ambit2.base.data.StructureRecord

Packages that use StructureRecord

Package	Description
ambit2.base.data	Base data structures; no chemistry.
ambit2.core.io	Input output support.
ambit2.core.io.pdb
ambit2.db
ambit2.db.readers
ambit2.db.results
ambit2.reactions.reactor
ambit2.rules.json

Uses of StructureRecord in ambit2.base.data

Subclasses of StructureRecord in ambit2.base.data

Modifier and Type	Class and Description
class	SubstanceRecord Same as the parent class, but with related structures

Uses of StructureRecord in ambit2.core.io

Fields in ambit2.core.io declared as StructureRecord

Modifier and Type	Field and Description
protected StructureRecord	RawIteratingMOLReader.r
protected StructureRecord	RawIteratingSDFReader.r

Uses of StructureRecord in ambit2.core.io.pdb

Fields in ambit2.core.io.pdb declared as StructureRecord

Modifier and Type	Field and Description
protected StructureRecord	RawIteratingPDBReader.r

Uses of StructureRecord in ambit2.db

Methods in ambit2.db that return StructureRecord

Modifier and Type	Method and Description
StructureRecord	RepositoryReader.next()
StructureRecord	RepositoryReader.process(Target target)

Uses of StructureRecord in ambit2.db.readers

Methods in ambit2.db.readers with parameters of type StructureRecord

Modifier and Type	Method and Description
BufferedImage	DbCompoundImageTools.getImage(Connection connection, StructureRecord id)

Uses of StructureRecord in ambit2.db.results

Fields in ambit2.db.results declared as StructureRecord

Modifier and Type	Field and Description
protected StructureRecord	StoredQueryTableModel.workingRecord

Uses of StructureRecord in ambit2.reactions.reactor

Fields in ambit2.reactions.reactor with type parameters of type StructureRecord

Modifier and Type	Field and Description
List<StructureRecord>	ReactorStrategy.allowedProducts
List<StructureRecord>	ReactorStrategy.forbiddenProducts

Methods in ambit2.reactions.reactor with parameters of type StructureRecord

Modifier and Type	Method and Description
static void	ReactorStrategy.configureStructureRecord(StructureRecord strRecord, org.openscience.cdk.inchi.InChIGeneratorFactory igf, List<net.sf.jniinchi.INCHI_OPTION> options)

Uses of StructureRecord in ambit2.rules.json

Methods in ambit2.rules.json that return StructureRecord

Modifier and Type	Method and Description
static StructureRecord	JSONParsingUtils.getStructureRecord(com.fasterxml.jackson.databind.JsonNode node, JSONParsingUtils.STRUCTURE_RECORD_INPUT_INFO inputInfo)

Methods in ambit2.rules.json that return types with arguments of type StructureRecord

Modifier and Type	Method and Description
static List<StructureRecord>	JSONParsingUtils.getStructureRecords(com.fasterxml.jackson.databind.JsonNode node, String keyword, JSONParsingUtils.STRUCTURE_RECORD_INPUT_INFO inputInfo, boolean isRequired)